Making journal articles ‘live’: turning academic writing into scientific dialog     

Ola Ahlqvist  Francis Harvey  Hyowon Ban  Wei Chen  Shaun Fontanella  Meng Guo  Nisheet Singh 《GeoJournal》2013,78(1):61-68

Web 2.0 services and social networking offer possibilities to transform academic publishing to facilitate scientific dialogue. We present ‘The Live Paper’ in this editorial as a concept to consider how to leverage existing web technologies to produce rich, omnidirectional, and interactive narratives on research. Following the format of a traditional research report we describe and discuss how to enrich research reports utilizing various types of analytical tools, data, and web services in a published paper embedded in evolving scientific discourse. We also consider how the live papers would influence the practice, culture, and economy of academic research. We conclude that geospatial researchers have an opportunity to lead this development towards richer and more open ways of communicating our findings. The technology and infrastructure to do so exist today, but several barriers remain.  相似文献   

Evaluating TCE Abiotic and Biotic Degradation Pathways in a Permeable Reactive Barrier Using Compound Specific Isotope Analysis     

Paulo Lojkasek‐Lima  Ramon Aravena  Orfan Shouakar‐Stash  Shaun K. Frape  Massimo Marchesi  Stephanie Fiorenza  John Vogan 《Ground Water Monitoring & Remediation》2012,32(4):53-62

A pilot‐scale zero valent iron (ZVI) Permeable Reactive Barrier (PRB) was installed using an azimuth‐controlled ‐vertical hydrofracturing at an industrial facility to treat a chlorinated Volatile Organic Compound (VOC) plume. Following ZVI injection, no significant reduction in concentration was observed to occur with the exception of some multilevel monitoring wells, which also showed high levels of total organic carbon (TOC). These patterns suggested that the zero valent iron was not well distributed in the PRB creating leaky conditions. The geochemical data indicated reducing conditions in these areas where VOC reduction was observed, suggesting that biotic processes, associated to the guar used in the injection of the iron, could be a major mechanism of VOC degradation. Compound‐Specific Isotope Analysis (CSIA) using both carbon and chlorine stable isotopes were used as a complementary tool for evaluating the contribution of abiotic and biotic processes to VOC trends in the vicinity of the PRB. The isotopic data showed enriched isotope values around the PRB compared to the isotope composition of the VOC source confirming that VOC degradation is occurring along the PRB. A batch experiment using site groundwater collected near the VOC source and the ZVI used in the PRB was performed to evaluate the site‐specific abiotic isotopic fractionation patterns. Field isotopic trends, typical of biodegradations were observed at the site and were different from those obtained during the batch abiotic experiment. These differences in isotopic trends combined with changes in VOC concentrations and redox parameters suggested that biotic processes are the predominant pathways involved in the degradation of VOCs in the vicinity of the PRB.  相似文献   

The Geographies of the Justice for Janitors     

Luis L.M. Aguiar  Shaun Ryan 《Geoforum》2009,(6):949-958

On the heels of the successes of its Justice for Janitors (J4J) model to organize cleaners in the United States, the Service Employees International Union is exporting this model to Canada and Australia. In this article we examine the geographies of the implementation of the J4J model in these two contexts. And while the “ramping up” of the J4J to the globe makes sense to organize an increasingly globalizing cleaning industry, the model must nonetheless pay attention to the local scale and histories of existing organizations.  相似文献   

Generating dark matter halo merger trees     

Hannah Parkinson  Shaun Cole  John Helly 《Monthly notices of the Royal Astronomical Society》2008,383(2):557-564

We present a new Monte Carlo algorithm to generate merger trees describing the formation history of dark matter haloes. The algorithm is a modification of the algorithm of Cole et al. used in the galform semi-analytic galaxy formation model. As such, it is based on the Extended Press–Schechter theory and so should be applicable to hierarchical models with a wide range of power spectra and cosmological models. It is tuned to be in accurate agreement with the conditional mass functions found in the analysis of merger trees extracted from the Λ cold dark matter Millennium N -body simulation. We present a comparison of its predictions not only with these conditional mass functions, but also with additional statistics of the Millennium Simulation halo merger histories. In all cases, we find it to be in good agreement with the Millennium Simulation and thus it should prove to be a very useful tool for semi-analytic models of galaxy formation and for modelling hierarchical structure formation in general. We have made our merger tree generation code and code to navigate the trees available at http://star-www.dur.ac.uk/~cole/merger_trees .  相似文献   

Mapping river bathymetries: Evaluating topobathymetric LiDAR survey     

Daniele Tonina  James A. McKean  Rohan M. Benjankar  C. Wayne Wright  Jaime R. Goode  Qiuwen Chen  William J. Reeder  Richard A. Carmichael  Michael R. Edmondson 《地球表面变化过程与地形》2019,44(2):507-520

Advances in topobathymetric LiDARs could enable rapid surveys at sub-meter resolution over entire stream networks. This is the first step to improving our knowledge of riverine systems, both their morphology and role in ecosystems. The Experimental Advanced Airborne Research LiDAR B (EAARL-B) system is one such topobathymetric sensor, capable of mapping both terrestrial and aquatic systems. Whereas the original EAARL was developed to survey littoral areas, the new version, EAARL-B, was also designed for riverine systems but has yet to be tested. Thus, we evaluated the ability of EAARL-B to map bathymetry and floodplain topography at sub-meter resolution in a mid-size gravel-bed river. We coupled the EAARL-B survey with highly accurate field surveys (0.03 m vertical accuracy and approximately 0.6 by 0.6 m resolution) of three morphologically distinct reaches, approximately 200 m long 15 m wide, of the Lemhi River (Idaho, USA). Both point-to-point and raster-to-raster comparisons between ground and EAARL-B surveyed elevations show that differences (ground minus EAARL-B surveyed elevations) over the entire submerged topography are small (root mean square error, RMSE, and median absolute error, M, of 0.11 m), and large differences (RMSE, between 0.15 and 0.38 m and similar M) are mainly present in areas with abrupt elevation changes and covered by dense overhanging vegetation. RMSEs are as low as 0.03 m over paved smooth surfaces, 0.07 m in submerged, gradually varying topography, and as large as 0.24 m along banks with and without dense, tall vegetation. EAARL-B performance is chiefly limited by point density in areas with strong elevation gradients and by LiDAR footprint size (0.2 m) in areas with topographic features of similar size as the LiDAR footprint. © 2018 John Wiley & Sons, Ltd.  相似文献   

Hydrological Outlook UK: an operational streamflow and groundwater level forecasting system at monthly to seasonal time scales     

Christel Prudhomme  Shaun Harrigan  David Boorman  Jeff Knight  Victoria Bell 《水文科学杂志》2017,62(16):2753-2768

This paper describes the development of the first operational seasonal hydrological forecasting service for the UK, the Hydrological Outlook UK (HOUK). Since June 2013, this service has delivered monthly forecasts of streamflow and groundwater levels, with an emphasis on forecasting hydrological conditions over the next three months, accompanied by outlooks over longer time horizons. This system is based on three complementary approaches combined to produce the outlooks: (i) national-scale modelling of streamflow and groundwater levels based on dynamic seasonal rainfall forecasts, (ii) catchment-scale modelling where streamflow and groundwater level models are driven by historical meteorological forcings (i.e. the Ensemble Streamflow Prediction, ESP, approach), and (iii) a catchment-scale statistical method based on persistence and historical analogues. This paper provides the background to the Hydrological Outlook, describes the various component methods in detail and then considers the impact and usefulness of the product. As an example of a multi-method, operational seasonal hydrological forecasting system, it is hoped that this overview provides useful information and context for other forecasting initiatives around the world.  相似文献   

Quantifying erosional equilibrium across a slowly eroding,soil mantled landscape     

Arjun M. Heimsath  Oliver A. Chadwick  Josh J. Roering  Shaun R. Levick 《地球表面变化过程与地形》2020,45(3):499-510

The textbook concept of an equilibrium landscape, which posits that soil production and erosion are balanced and equal channel incision, is rarely quantified for natural systems. In contrast to mountainous, rapidly eroding terrain, low relief and slow-eroding landscapes are poorly studied despite being widespread and densely inhabited. We use three field sites along a climosequence in South Africa to quantify very slow (2-5 m/My) soil production rates that do not vary across hillslopes or with climate. We show these rates to be indistinguishable from spatially invariant catchment-average erosion rates while soil depth and chemical weathering increase strongly with rainfall across our sites. Our analyses imply landscape-scale equilibrium although the dominant means of denudation varies from physical weathering in dry climates to chemical weathering in wet climates. In the two wetter sites, chemical weathering is so significant that clay translocates both vertically in soil columns and horizontally down hillslope catenas, resulting in particle size variation and the accumulation of buried stone lines at the clay-rich depth. We infer hundred-thousand-year residence times of these stone lines and suggest that bioturbation by termites plays a key role in exhuming sediment into the mobile soil layer from significant depths below the clay layer. Our results suggest how tradeoffs in physical and chemical weathering, potentially modulated by biological processes, shape slowly eroding, equilibrium landscapes. © 2019 John Wiley & Sons, Ltd.  相似文献   

The 2dF Galaxy Redshift Survey: Wiener reconstruction of the cosmic web     

Pirin Erdo&#;du  Ofer Lahav  Saleem Zaroubi  George Efstathiou  Steve Moody  John A. Peacock  Matthew Colless  Ivan K. Baldry  Carlton M. Baugh  Joss Bland-Hawthorn  Terry Bridges  Russell Cannon  Shaun Cole  Chris Collins  Warrick Couch  Gavin Dalton  Roberto De Propris  Simon P. Driver  Richard S. Ellis  Carlos S. Frenk  Karl Glazebrook  Carole Jackson  Ian Lewis  Stuart Lumsden  Steve Maddox  Darren Madgwick  Peder Norberg  Bruce A. Peterson  Will Sutherland  Keith Taylor 《Monthly notices of the Royal Astronomical Society》2004,352(3):939-960

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Assessing the past thermal and chemical history of fluids in crystalline rock by combining fluid inclusion and isotopic investigations of fracture calcite     

Alexander Blyth  Shaun Frape  Runar Blomqvist  Pasi Nissinen 《Applied Geochemistry》2000,15(10):144

Fluid inclusion studies combined with the isotope geochemistry of several generations of fracture calcite from the Olkiluoto research site, Finland, has been used to better understand the past thermal and fluid history in the crystalline rock environment. Typically, fracture mineral investigations use O and C isotopes from calcite and an estimate of the isotopic composition of the water that precipitated the calcite to perform δ¹⁸O geothermometry calculations to estimate past temperature conditions. By combining fluid inclusion information with calcite isotopes, one can directly measure the temperature at which the calcite formed and can better determine past fluid compositions. Isotopic, petrologic and fluid inclusion studies at the Olkiluoto research site in Finland were undertaken as part of an investigation within the Finnish nuclear waste disposal program. The study revealed that four fluids were recorded by fracture calcites. From petrologic evidence, the first fluid precipitated crystalline calcite at 151–225°C with a δ¹³C signature of −21 to −13.9‰ PDB and a δ¹⁸O signature of 12.3–13.0‰ SMOW. These closed fracture fillings were found at depths greater than 500 m and were formed from a high temperature, low salinity, Na–Cl fluid of possible meteoric water altered by exchange with wallrock or dilute basinal origin. The next fluid precipitated crystalline calcite with clay at 92–210°C with a δ¹³C signature of −2.6 to +3.8‰ PDB and a δ¹⁸O signature of 19.4–20.7‰ SMOW. These closed fracture fillings were found at depths less than 500 m and were formed from a moderate to high temperature, low to moderate salinity, Na–Cl fluid, likely of magmatic origin. The last group of calcites to form, record the presence of two distinct fluid types. The platy (a) calcite formed at 95–238°C with a δ¹³C signature of −12.2 to −3.8‰ PDB and a δ¹⁸O signature of 14.9–19.6‰ SMOW, from a high temperature, low salinity, Na–Cl fluid of possible magmatic origin. The platy (b) calcite formed at 67–98°C with a δ¹³C signature of −13.0 to −6.2‰ PDB and a δ¹⁸O signature of 15.1–20.1‰ SMOW, from a low temperature, high salinity, Ca–Na–Cl fluid of possible basinal brine origin. The two calcites are related through a mixing between the two end members. The source of the fluids for the platy grey (a) calcites could be the olivine diabase dykes and sills that cut through the site. The source of fluids for the platy (b) calcites could be the Jotnian arkosic sandstone formations in the northern part of the site. At the Olkiluoto site, δ¹⁸O geothermometry does not agree with fluid inclusion data. The original source of the water that forms the calcite has the largest effect on the isotopic signature of the calcites formed. Large isotopic shifts are seen in any water by mineral precipitation during cooling under rock–water equilibrium fractionation conditions. Different calcite isotopic signatures are produced depending on whether cooling occurred in an open or closed system. Water–rock interaction, at varying W/R ratios, between a water and a host rock can explain the isotopic shifts in many of the calcites observed. In some cases it is possible to shift the δ¹⁸O of the water by +11.5‰ (SMOW) using a realistic water–rock ratio. This process still does not explain some of the very positive δ¹⁸O values calculated using fluid inclusion data. Several other processes, such as low temperature recrystallization, boiling, kinetic effects and dissolution of calcite from fluid inclusion walls can affect isotopic signatures to varying degrees. The discrepancy between fluid inclusion data and δ¹⁸O geothermometry at the Olkiluoto site was most likely due to poor constraint on the original source of the water.  相似文献   

The 2dF Galaxy Redshift Survey: correlation with the ROSAT-ESO flux-limited X-ray galaxy cluster survey     

Matt Hilton  Chris Collins  Roberto De Propris  Ivan K. Baldry  Carlton M. Baugh  Joss Bland-Hawthorn  Terry Bridges  Russell Cannon  Shaun Cole  Matthew Colless  Warrick J. Couch  Gavin B. Dalton  Simon P. Driver  George Efstathiou  Richard S. Ellis  Carlos S. Frenk  Karl Glazebrook  Carole A. Jackson  Ofer Lahav  Ian Lewis  Stuart Lumsden  Steve J. Maddox  Darren Madgwick  Peder Norberg  John A. Peacock  Bruce A. Peterson  Will Sutherland  Keith Taylor 《Monthly notices of the Royal Astronomical Society》2005,363(2):661-674

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